Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fen1P39749 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Fen1P39749 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Fen1P39749 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fen1P39749 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fen1P39749 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.15■□□□□ 0.34
Fen1P39749 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.15■□□□□ 0.34
Fen1P39749 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Fen1P39749 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fen1P39749 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fen1P39749 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Fen1P39749 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Gm2399-201ENSMUST00000104944 225 ntBASIC17.14■□□□□ 0.33
Fen1P39749 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Fen1P39749 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fen1P39749 Gm38285-201ENSMUST00000192928 922 ntBASIC17.14■□□□□ 0.33
Fen1P39749 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fen1P39749 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.14■□□□□ 0.33
Fen1P39749 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Fen1P39749 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Fen1P39749 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.13■□□□□ 0.33
Fen1P39749 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fen1P39749 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fen1P39749 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fen1P39749 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fen1P39749 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.12■□□□□ 0.33
Fen1P39749 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Haglr-201ENSMUST00000100000 2085 ntBASIC17.12■□□□□ 0.33
Fen1P39749 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Fen1P39749 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.12■□□□□ 0.33
Fen1P39749 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Fen1P39749 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Fen1P39749 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fen1P39749 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
Fen1P39749 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Fen1P39749 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.11■□□□□ 0.33
Fen1P39749 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fen1P39749 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.11■□□□□ 0.33
Fen1P39749 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Fen1P39749 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.11■□□□□ 0.33
Fen1P39749 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fen1P39749 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
Fen1P39749 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.11■□□□□ 0.33
Fen1P39749 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fen1P39749 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Fen1P39749 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.1■□□□□ 0.33
Fen1P39749 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.1■□□□□ 0.33
Fen1P39749 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.1■□□□□ 0.33
Fen1P39749 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms