Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.92□□□□□ -0.02
Upk2P38575 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Upk2P38575 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Gm21814-202ENSMUST00000203277 873 ntBASIC14.92□□□□□ -0.02
Upk2P38575 Gm3375-201ENSMUST00000203929 796 ntBASIC14.92□□□□□ -0.02
Upk2P38575 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.92□□□□□ -0.02
Upk2P38575 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk2P38575 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Upk2P38575 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.91□□□□□ -0.02
Upk2P38575 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Upk2P38575 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.91□□□□□ -0.02
Upk2P38575 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.91□□□□□ -0.02
Upk2P38575 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Upk2P38575 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk2P38575 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Upk2P38575 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Upk2P38575 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.9□□□□□ -0.02
Upk2P38575 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Upk2P38575 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.9□□□□□ -0.02
Upk2P38575 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.9□□□□□ -0.02
Upk2P38575 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Mir5122-201ENSMUST00000175004 89 ntBASIC14.9□□□□□ -0.02
Upk2P38575 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.9□□□□□ -0.02
Upk2P38575 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Gm7791-201ENSMUST00000219066 539 ntBASIC14.9□□□□□ -0.02
Upk2P38575 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk2P38575 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Upk2P38575 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk2P38575 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.89□□□□□ -0.03
Upk2P38575 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Upk2P38575 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.89□□□□□ -0.03
Upk2P38575 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.89□□□□□ -0.03
Upk2P38575 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Gm27000-201ENSMUST00000182943 842 ntBASIC14.89□□□□□ -0.03
Upk2P38575 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.89□□□□□ -0.03
Upk2P38575 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Upk2P38575 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.89□□□□□ -0.03
Upk2P38575 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.89□□□□□ -0.03
Upk2P38575 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Upk2P38575 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk2P38575 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Upk2P38575 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk2P38575 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk2P38575 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk2P38575 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.88□□□□□ -0.03
Upk2P38575 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.88□□□□□ -0.03
Upk2P38575 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms