Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.75■□□□□ 0.27
HmgclP38060 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.75■□□□□ 0.27
HmgclP38060 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.75■□□□□ 0.27
HmgclP38060 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.75■□□□□ 0.27
HmgclP38060 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.75■□□□□ 0.27
HmgclP38060 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HmgclP38060 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HmgclP38060 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HmgclP38060 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.74■□□□□ 0.27
HmgclP38060 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HmgclP38060 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HmgclP38060 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HmgclP38060 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.73■□□□□ 0.27
HmgclP38060 Gm11539-201ENSMUST00000119837 557 ntBASIC16.73■□□□□ 0.27
HmgclP38060 Gm13436-201ENSMUST00000120418 567 ntBASIC16.73■□□□□ 0.27
HmgclP38060 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.73■□□□□ 0.27
HmgclP38060 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.73■□□□□ 0.27
HmgclP38060 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HmgclP38060 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.73■□□□□ 0.27
HmgclP38060 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HmgclP38060 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HmgclP38060 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HmgclP38060 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HmgclP38060 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
HmgclP38060 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HmgclP38060 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HmgclP38060 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HmgclP38060 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.72■□□□□ 0.27
HmgclP38060 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HmgclP38060 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HmgclP38060 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HmgclP38060 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HmgclP38060 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.72■□□□□ 0.27
HmgclP38060 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HmgclP38060 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.71■□□□□ 0.27
HmgclP38060 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.71■□□□□ 0.27
HmgclP38060 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HmgclP38060 Gm13559-201ENSMUST00000120476 863 ntBASIC16.71■□□□□ 0.27
HmgclP38060 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.71■□□□□ 0.27
HmgclP38060 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HmgclP38060 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HmgclP38060 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HmgclP38060 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HmgclP38060 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HmgclP38060 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HmgclP38060 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HmgclP38060 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.7■□□□□ 0.26
HmgclP38060 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.7■□□□□ 0.26
HmgclP38060 Gm2274-201ENSMUST00000184539 609 ntBASIC16.7■□□□□ 0.26
HmgclP38060 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HmgclP38060 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms