Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Foxa1P35582 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Foxa1P35582 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.74■□□□□ 0.11
Foxa1P35582 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Foxa1P35582 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.73■□□□□ 0.11
Foxa1P35582 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.73■□□□□ 0.11
Foxa1P35582 Gm13559-201ENSMUST00000120476 863 ntBASIC15.73■□□□□ 0.11
Foxa1P35582 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.73■□□□□ 0.11
Foxa1P35582 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.73■□□□□ 0.11
Foxa1P35582 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.73■□□□□ 0.11
Foxa1P35582 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxa1P35582 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Foxa1P35582 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Foxa1P35582 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Gm18958-201ENSMUST00000174258 762 ntBASIC15.72■□□□□ 0.11
Foxa1P35582 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.72■□□□□ 0.11
Foxa1P35582 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxa1P35582 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.71■□□□□ 0.11
Foxa1P35582 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.71■□□□□ 0.11
Foxa1P35582 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Foxa1P35582 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Foxa1P35582 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.71■□□□□ 0.11
Foxa1P35582 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxa1P35582 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Foxa1P35582 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Foxa1P35582 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Foxa1P35582 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.7■□□□□ 0.1
Foxa1P35582 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.7■□□□□ 0.1
Foxa1P35582 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.7■□□□□ 0.1
Foxa1P35582 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Foxa1P35582 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Foxa1P35582 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxa1P35582 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Foxa1P35582 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.69■□□□□ 0.1
Foxa1P35582 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Foxa1P35582 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms