Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sftpa1P35242 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
Sftpa1P35242 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.68■□□□□ 0.1
Sftpa1P35242 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
Sftpa1P35242 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.68■□□□□ 0.1
Sftpa1P35242 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.68■□□□□ 0.1
Sftpa1P35242 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sftpa1P35242 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Grk6-206ENSMUST00000224995 2971 ntBASIC15.67■□□□□ 0.1
Sftpa1P35242 Phf7-203ENSMUST00000226565 1971 ntBASIC15.67■□□□□ 0.1
Sftpa1P35242 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.67■□□□□ 0.1
Sftpa1P35242 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sftpa1P35242 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.66■□□□□ 0.1
Sftpa1P35242 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.66■□□□□ 0.1
Sftpa1P35242 Gm12644-201ENSMUST00000119935 606 ntBASIC15.66■□□□□ 0.1
Sftpa1P35242 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Gm27000-201ENSMUST00000182943 842 ntBASIC15.66■□□□□ 0.1
Sftpa1P35242 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.66■□□□□ 0.1
Sftpa1P35242 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sftpa1P35242 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.66■□□□□ 0.1
Sftpa1P35242 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sftpa1P35242 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.65■□□□□ 0.1
Sftpa1P35242 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.65■□□□□ 0.1
Sftpa1P35242 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.65■□□□□ 0.1
Sftpa1P35242 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.65■□□□□ 0.1
Sftpa1P35242 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sftpa1P35242 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sftpa1P35242 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms