Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc6a13P31649 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a13P31649 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a13P31649 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc6a13P31649 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc6a13P31649 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.25■□□□□ 0.35
Slc6a13P31649 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.25■□□□□ 0.35
Slc6a13P31649 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a13P31649 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a13P31649 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a13P31649 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.24■□□□□ 0.35
Slc6a13P31649 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Slc6a13P31649 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a13P31649 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc6a13P31649 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.23■□□□□ 0.35
Slc6a13P31649 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a13P31649 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc6a13P31649 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a13P31649 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc6a13P31649 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a13P31649 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.22■□□□□ 0.35
Slc6a13P31649 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.22■□□□□ 0.35
Slc6a13P31649 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a13P31649 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a13P31649 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc6a13P31649 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a13P31649 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms