Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.55■□□□□ 0.72
Vcam1P29533 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vcam1P29533 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.55■□□□□ 0.72
Vcam1P29533 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Vcam1P29533 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Vcam1P29533 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.55■□□□□ 0.72
Vcam1P29533 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.55■□□□□ 0.72
Vcam1P29533 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.55■□□□□ 0.72
Vcam1P29533 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcam1P29533 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcam1P29533 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vcam1P29533 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcam1P29533 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcam1P29533 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Vcam1P29533 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcam1P29533 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.53■□□□□ 0.72
Vcam1P29533 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Vcam1P29533 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Vcam1P29533 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.53■□□□□ 0.72
Vcam1P29533 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.53■□□□□ 0.72
Vcam1P29533 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcam1P29533 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Vcam1P29533 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Gm12895-201ENSMUST00000122214 226 ntBASIC19.52■□□□□ 0.72
Vcam1P29533 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vcam1P29533 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcam1P29533 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vcam1P29533 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vcam1P29533 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.52■□□□□ 0.72
Vcam1P29533 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vcam1P29533 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.52■□□□□ 0.71
Vcam1P29533 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Vcam1P29533 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Vcam1P29533 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vcam1P29533 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.51■□□□□ 0.71
Vcam1P29533 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.51■□□□□ 0.71
Vcam1P29533 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Vcam1P29533 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Vcam1P29533 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.51■□□□□ 0.71
Vcam1P29533 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.51■□□□□ 0.71
Vcam1P29533 Birc2-201ENSMUST00000054878 378 ntBASIC19.51■□□□□ 0.71
Vcam1P29533 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vcam1P29533 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.51■□□□□ 0.71
Vcam1P29533 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcam1P29533 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Vcam1P29533 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vcam1P29533 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.5■□□□□ 0.71
Vcam1P29533 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms