Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl6P27784 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccl6P27784 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Ccl6P27784 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.27□□□□□ -0.28
Ccl6P27784 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.27□□□□□ -0.28
Ccl6P27784 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.27□□□□□ -0.28
Ccl6P27784 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl6P27784 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.27□□□□□ -0.28
Ccl6P27784 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl6P27784 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl6P27784 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ccl6P27784 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccl6P27784 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccl6P27784 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccl6P27784 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccl6P27784 Gm22240-201ENSMUST00000175225 82 ntBASIC13.26□□□□□ -0.29
Ccl6P27784 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.26□□□□□ -0.29
Ccl6P27784 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccl6P27784 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl6P27784 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccl6P27784 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccl6P27784 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Mir1199-201ENSMUST00000117015 119 ntBASIC13.25□□□□□ -0.29
Ccl6P27784 Gm12085-201ENSMUST00000119263 940 ntBASIC13.25□□□□□ -0.29
Ccl6P27784 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccl6P27784 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ccl6P27784 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl6P27784 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccl6P27784 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl6P27784 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms