Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.72■□□□□ 0.75
Pde6aP27664 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pde6aP27664 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pde6aP27664 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6aP27664 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.71■□□□□ 0.75
Pde6aP27664 Gm10566-201ENSMUST00000086739 996 ntBASIC19.71■□□□□ 0.75
Pde6aP27664 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pde6aP27664 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pde6aP27664 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.71■□□□□ 0.75
Pde6aP27664 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Pde6aP27664 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.7■□□□□ 0.74
Pde6aP27664 Gm7213-201ENSMUST00000215977 950 ntBASIC19.7■□□□□ 0.74
Pde6aP27664 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pde6aP27664 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.7■□□□□ 0.74
Pde6aP27664 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6aP27664 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pde6aP27664 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Actl10-202ENSMUST00000226583 1501 ntBASIC19.69■□□□□ 0.74
Pde6aP27664 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6aP27664 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pde6aP27664 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pde6aP27664 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pde6aP27664 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.68■□□□□ 0.74
Pde6aP27664 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pde6aP27664 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pde6aP27664 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pde6aP27664 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6aP27664 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Pde6aP27664 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.67■□□□□ 0.74
Pde6aP27664 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.67■□□□□ 0.74
Pde6aP27664 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.67■□□□□ 0.74
Pde6aP27664 Gm18032-201ENSMUST00000222541 538 ntBASIC19.67■□□□□ 0.74
Pde6aP27664 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pde6aP27664 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.67■□□□□ 0.74
Pde6aP27664 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6aP27664 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Pde6aP27664 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pde6aP27664 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pde6aP27664 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.66■□□□□ 0.74
Pde6aP27664 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6aP27664 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.65■□□□□ 0.74
Pde6aP27664 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Mir1668-201ENSMUST00000184114 107 ntBASIC19.65■□□□□ 0.74
Pde6aP27664 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pde6aP27664 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms