Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
Nfkb1P25799 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.48■□□□□ 0.39
Nfkb1P25799 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nfkb1P25799 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nfkb1P25799 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.48■□□□□ 0.39
Nfkb1P25799 Gm7284-201ENSMUST00000131667 944 ntBASIC17.48■□□□□ 0.39
Nfkb1P25799 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.48■□□□□ 0.39
Nfkb1P25799 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.48■□□□□ 0.39
Nfkb1P25799 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nfkb1P25799 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nfkb1P25799 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nfkb1P25799 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Gm11355-201ENSMUST00000121120 306 ntBASIC17.47■□□□□ 0.39
Nfkb1P25799 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.47■□□□□ 0.39
Nfkb1P25799 Gm29518-201ENSMUST00000190858 372 ntBASIC17.47■□□□□ 0.39
Nfkb1P25799 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.47■□□□□ 0.39
Nfkb1P25799 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Nfkb1P25799 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nfkb1P25799 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nfkb1P25799 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nfkb1P25799 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.46■□□□□ 0.38
Nfkb1P25799 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nfkb1P25799 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nfkb1P25799 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Gm8969-201ENSMUST00000199694 526 ntBASIC17.45■□□□□ 0.38
Nfkb1P25799 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Nfkb1P25799 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.45■□□□□ 0.38
Nfkb1P25799 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nfkb1P25799 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.44■□□□□ 0.38
Nfkb1P25799 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Gm17808-201ENSMUST00000200859 894 ntBASIC17.44■□□□□ 0.38
Nfkb1P25799 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nfkb1P25799 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nfkb1P25799 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nfkb1P25799 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nfkb1P25799 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nfkb1P25799 Ank2-226ENSMUST00000189368 339 ntBASIC17.43■□□□□ 0.38
Nfkb1P25799 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms