Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pde6bP23440 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pde6bP23440 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pde6bP23440 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.52■□□□□ 0.56
Pde6bP23440 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pde6bP23440 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pde6bP23440 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6bP23440 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Pde6bP23440 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.52■□□□□ 0.56
Pde6bP23440 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pde6bP23440 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pde6bP23440 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pde6bP23440 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pde6bP23440 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pde6bP23440 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pde6bP23440 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Pde6bP23440 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.51■□□□□ 0.55
Pde6bP23440 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.51■□□□□ 0.55
Pde6bP23440 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pde6bP23440 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pde6bP23440 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pde6bP23440 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.5■□□□□ 0.55
Pde6bP23440 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.5■□□□□ 0.55
Pde6bP23440 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pde6bP23440 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.5■□□□□ 0.55
Pde6bP23440 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pde6bP23440 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pde6bP23440 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.5■□□□□ 0.55
Pde6bP23440 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.49■□□□□ 0.55
Pde6bP23440 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.49■□□□□ 0.55
Pde6bP23440 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.49■□□□□ 0.55
Pde6bP23440 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.49■□□□□ 0.55
Pde6bP23440 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Idnk-204ENSMUST00000226010 1898 ntBASIC18.49■□□□□ 0.55
Pde6bP23440 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.49■□□□□ 0.55
Pde6bP23440 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6bP23440 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pde6bP23440 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.48■□□□□ 0.55
Pde6bP23440 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.48■□□□□ 0.55
Pde6bP23440 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.48■□□□□ 0.55
Pde6bP23440 Gm17807-201ENSMUST00000186869 298 ntBASIC18.48■□□□□ 0.55
Pde6bP23440 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pde6bP23440 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pde6bP23440 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6bP23440 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Pde6bP23440 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pde6bP23440 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pde6bP23440 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.47■□□□□ 0.55
Pde6bP23440 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pde6bP23440 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.47■□□□□ 0.55
Pde6bP23440 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.47■□□□□ 0.55
Pde6bP23440 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.47■□□□□ 0.55
Pde6bP23440 Gm10566-201ENSMUST00000086739 996 ntBASIC18.47■□□□□ 0.55
Pde6bP23440 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.47■□□□□ 0.55
Pde6bP23440 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms