Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cntn1P12960 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cntn1P12960 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.31■□□□□ 0.2
Cntn1P12960 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cntn1P12960 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cntn1P12960 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.3■□□□□ 0.2
Cntn1P12960 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cntn1P12960 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.3■□□□□ 0.2
Cntn1P12960 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.3■□□□□ 0.2
Cntn1P12960 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.3■□□□□ 0.2
Cntn1P12960 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cntn1P12960 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cntn1P12960 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cntn1P12960 AA414768-201ENSMUST00000121924 1257 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Gm27389-201ENSMUST00000183622 195 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Mir1668-201ENSMUST00000184114 107 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Cntn1P12960 Gm8969-201ENSMUST00000199694 526 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Gm21559-201ENSMUST00000220638 855 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Gm8587-201ENSMUST00000076538 843 ntBASIC16.29■□□□□ 0.2
Cntn1P12960 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cntn1P12960 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cntn1P12960 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cntn1P12960 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cntn1P12960 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cntn1P12960 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.28■□□□□ 0.2
Cntn1P12960 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.28■□□□□ 0.2
Cntn1P12960 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.28■□□□□ 0.2
Cntn1P12960 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.28■□□□□ 0.2
Cntn1P12960 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cntn1P12960 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Cntn1P12960 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cntn1P12960 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.28■□□□□ 0.2
Cntn1P12960 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cntn1P12960 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cntn1P12960 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cntn1P12960 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cntn1P12960 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Cntn1P12960 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.27■□□□□ 0.2
Cntn1P12960 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.27■□□□□ 0.2
Cntn1P12960 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cntn1P12960 Gm10566-201ENSMUST00000086739 996 ntBASIC16.27■□□□□ 0.2
Cntn1P12960 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cntn1P12960 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cntn1P12960 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cntn1P12960 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cntn1P12960 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cntn1P12960 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cntn1P12960 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms