Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxd3P09027 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Gm23634-201ENSMUST00000175071 91 ntBASIC13.21□□□□□ -0.29
Hoxd3P09027 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxd3P09027 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.21□□□□□ -0.29
Hoxd3P09027 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxd3P09027 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.21□□□□□ -0.3
Hoxd3P09027 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxd3P09027 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxd3P09027 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.21□□□□□ -0.3
Hoxd3P09027 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxd3P09027 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Hoxd3P09027 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxd3P09027 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm18958-201ENSMUST00000174258 762 ntBASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm27389-201ENSMUST00000183622 195 ntBASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.2□□□□□ -0.3
Hoxd3P09027 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.2□□□□□ -0.3
Hoxd3P09027 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxd3P09027 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxd3P09027 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hoxd3P09027 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Gm7213-201ENSMUST00000215977 950 ntBASIC13.19□□□□□ -0.3
Hoxd3P09027 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.19□□□□□ -0.3
Hoxd3P09027 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxd3P09027 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxd3P09027 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hoxd3P09027 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Hoxd3P09027 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxd3P09027 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxd3P09027 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxd3P09027 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.18□□□□□ -0.3
Hoxd3P09027 AA414768-201ENSMUST00000121924 1257 ntBASIC13.18□□□□□ -0.3
Hoxd3P09027 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.18□□□□□ -0.3
Hoxd3P09027 Mir1668-201ENSMUST00000184114 107 ntBASIC13.18□□□□□ -0.3
Hoxd3P09027 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxd3P09027 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.18□□□□□ -0.3
Hoxd3P09027 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxd3P09027 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms