Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06328 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P06328 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P06328 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P06328 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
P06328 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.46□□□□□ -0.42
P06328 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P06328 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P06328 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.45□□□□□ -0.42
P06328 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Gm27275-201ENSMUST00000184318 272 ntBASIC12.45□□□□□ -0.42
P06328 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.45□□□□□ -0.42
P06328 Gm4974-201ENSMUST00000209974 875 ntBASIC12.45□□□□□ -0.42
P06328 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.45□□□□□ -0.42
P06328 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.45□□□□□ -0.42
P06328 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.45□□□□□ -0.42
P06328 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P06328 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
P06328 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.44□□□□□ -0.42
P06328 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.44□□□□□ -0.42
P06328 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.44□□□□□ -0.42
P06328 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
P06328 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.44□□□□□ -0.42
P06328 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.44□□□□□ -0.42
P06328 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.44□□□□□ -0.42
P06328 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.44□□□□□ -0.42
P06328 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
P06328 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
P06328 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
P06328 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
P06328 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P06328 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.43□□□□□ -0.42
P06328 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
P06328 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Gm12382-201ENSMUST00000122005 922 ntBASIC12.43□□□□□ -0.42
P06328 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.43□□□□□ -0.42
P06328 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.43□□□□□ -0.42
P06328 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
P06328 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P06328 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms