Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
P06320 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.8□□□□□ -0.68
P06320 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC10.8□□□□□ -0.68
P06320 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
P06320 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
P06320 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
P06320 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.8□□□□□ -0.68
P06320 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC10.8□□□□□ -0.68
P06320 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P06320 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.8□□□□□ -0.68
P06320 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC10.8□□□□□ -0.68
P06320 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.8□□□□□ -0.68
P06320 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
P06320 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P06320 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.8□□□□□ -0.68
P06320 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.8□□□□□ -0.68
P06320 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.8□□□□□ -0.68
P06320 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC10.79□□□□□ -0.68
P06320 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P06320 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
P06320 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P06320 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P06320 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.79□□□□□ -0.68
P06320 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
P06320 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.79□□□□□ -0.68
P06320 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P06320 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.79□□□□□ -0.68
P06320 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P06320 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06320 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
P06320 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06320 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.78□□□□□ -0.68
P06320 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06320 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06320 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06320 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms