Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.81■□□□□ 0.44
P04214 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
P04214 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.81■□□□□ 0.44
P04214 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
P04214 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04214 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.8■□□□□ 0.44
P04214 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Gm11594-201ENSMUST00000122313 162 ntBASIC17.8■□□□□ 0.44
P04214 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.8■□□□□ 0.44
P04214 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.8■□□□□ 0.44
P04214 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04214 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.79■□□□□ 0.44
P04214 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
P04214 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.79■□□□□ 0.44
P04214 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
P04214 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.79■□□□□ 0.44
P04214 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.79■□□□□ 0.44
P04214 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Gm5364-201ENSMUST00000216789 889 ntBASIC17.79■□□□□ 0.44
P04214 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
P04214 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.79■□□□□ 0.44
P04214 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04214 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
P04214 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
P04214 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.78■□□□□ 0.44
P04214 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.78■□□□□ 0.44
P04214 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.78■□□□□ 0.44
P04214 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04214 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04214 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
P04214 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.77■□□□□ 0.44
P04214 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.77■□□□□ 0.44
P04214 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.77■□□□□ 0.44
P04214 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.77■□□□□ 0.44
P04214 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04214 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04214 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.76■□□□□ 0.43
P04214 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.76■□□□□ 0.43
P04214 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.76■□□□□ 0.43
P04214 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Gm44430-201ENSMUST00000203376 995 ntBASIC17.76■□□□□ 0.43
P04214 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
P04214 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
P04214 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.76■□□□□ 0.43
P04214 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04214 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms