Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.26□□□□□ -0.13
Hoxa3P02831 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa3P02831 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa3P02831 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxa3P02831 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxa3P02831 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Hoxa3P02831 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxa3P02831 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxa3P02831 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxa3P02831 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hoxa3P02831 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa3P02831 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxa3P02831 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa3P02831 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxa3P02831 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Gm7370-201ENSMUST00000219471 767 ntBASIC14.23□□□□□ -0.13
Hoxa3P02831 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa3P02831 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms