Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Gm12644-201ENSMUST00000119935 606 ntBASIC20.91■□□□□ 0.94
Col4a1P02463 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.91■□□□□ 0.94
Col4a1P02463 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.91■□□□□ 0.94
Col4a1P02463 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.91■□□□□ 0.94
Col4a1P02463 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.91■□□□□ 0.94
Col4a1P02463 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.91■□□□□ 0.94
Col4a1P02463 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a1P02463 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.9■□□□□ 0.94
Col4a1P02463 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.9■□□□□ 0.94
Col4a1P02463 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Col4a1P02463 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a1P02463 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a1P02463 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a1P02463 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.89■□□□□ 0.93
Col4a1P02463 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col4a1P02463 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col4a1P02463 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col4a1P02463 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a1P02463 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a1P02463 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col4a1P02463 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.88■□□□□ 0.93
Col4a1P02463 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a1P02463 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Col4a1P02463 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a1P02463 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.88■□□□□ 0.93
Col4a1P02463 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.88■□□□□ 0.93
Col4a1P02463 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.88■□□□□ 0.93
Col4a1P02463 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a1P02463 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.88■□□□□ 0.93
Col4a1P02463 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a1P02463 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Col4a1P02463 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Col4a1P02463 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.87■□□□□ 0.93
Col4a1P02463 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.87■□□□□ 0.93
Col4a1P02463 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.87■□□□□ 0.93
Col4a1P02463 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a1P02463 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Col4a1P02463 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Col4a1P02463 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.86■□□□□ 0.93
Col4a1P02463 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.86■□□□□ 0.93
Col4a1P02463 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col4a1P02463 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Col4a1P02463 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col4a1P02463 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a1P02463 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.85■□□□□ 0.93
Col4a1P02463 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.85■□□□□ 0.93
Col4a1P02463 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.85■□□□□ 0.93
Col4a1P02463 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.85■□□□□ 0.93
Col4a1P02463 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.85■□□□□ 0.93
Col4a1P02463 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Col4a1P02463 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a1P02463 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col4a1P02463 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Col4a1P02463 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms