Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TcraP01849 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.47□□□□□ -0.41
TcraP01849 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Gm38205-201ENSMUST00000192243 258 ntBASIC12.47□□□□□ -0.41
TcraP01849 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.47□□□□□ -0.41
TcraP01849 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TcraP01849 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TcraP01849 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
TcraP01849 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TcraP01849 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.46□□□□□ -0.41
TcraP01849 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.46□□□□□ -0.41
TcraP01849 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.46□□□□□ -0.41
TcraP01849 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
TcraP01849 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TcraP01849 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TcraP01849 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TcraP01849 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TcraP01849 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TcraP01849 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.45□□□□□ -0.42
TcraP01849 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.45□□□□□ -0.42
TcraP01849 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TcraP01849 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TcraP01849 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.45□□□□□ -0.42
TcraP01849 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.45□□□□□ -0.42
TcraP01849 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.45□□□□□ -0.42
TcraP01849 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms