Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CopeO89079 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.59■□□□□ 0.41
CopeO89079 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CopeO89079 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.59■□□□□ 0.41
CopeO89079 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.58■□□□□ 0.41
CopeO89079 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CopeO89079 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CopeO89079 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CopeO89079 Gm15375-201ENSMUST00000119510 849 ntBASIC17.58■□□□□ 0.4
CopeO89079 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Gm4968-201ENSMUST00000071458 858 ntBASIC17.58■□□□□ 0.4
CopeO89079 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CopeO89079 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.57■□□□□ 0.4
CopeO89079 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CopeO89079 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CopeO89079 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CopeO89079 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CopeO89079 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CopeO89079 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CopeO89079 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CopeO89079 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.56■□□□□ 0.4
CopeO89079 Gm2559-201ENSMUST00000201323 363 ntBASIC17.56■□□□□ 0.4
CopeO89079 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.56■□□□□ 0.4
CopeO89079 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CopeO89079 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopeO89079 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CopeO89079 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.55■□□□□ 0.4
CopeO89079 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.55■□□□□ 0.4
CopeO89079 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CopeO89079 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.55■□□□□ 0.4
CopeO89079 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopeO89079 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
CopeO89079 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.55■□□□□ 0.4
CopeO89079 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Gm5408-201ENSMUST00000197998 747 ntBASIC17.54■□□□□ 0.4
CopeO89079 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.54■□□□□ 0.4
CopeO89079 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CopeO89079 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CopeO89079 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms