Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hdac3O88895 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Hdac3O88895 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.21■□□□□ 0.03
Hdac3O88895 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.21■□□□□ 0.03
Hdac3O88895 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hdac3O88895 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac3O88895 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hdac3O88895 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hdac3O88895 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Hdac3O88895 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Hdac3O88895 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.2■□□□□ 0.02
Hdac3O88895 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.2■□□□□ 0.02
Hdac3O88895 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.2■□□□□ 0.02
Hdac3O88895 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.2■□□□□ 0.02
Hdac3O88895 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.2■□□□□ 0.02
Hdac3O88895 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.2■□□□□ 0.02
Hdac3O88895 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hdac3O88895 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac3O88895 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.19■□□□□ 0.02
Hdac3O88895 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hdac3O88895 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac3O88895 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.19■□□□□ 0.02
Hdac3O88895 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac3O88895 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hdac3O88895 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Gm10653-202ENSMUST00000139570 835 ntBASIC15.18■□□□□ 0.02
Hdac3O88895 Gm6576-201ENSMUST00000169678 883 ntBASIC15.18■□□□□ 0.02
Hdac3O88895 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Mir8112-201ENSMUST00000184382 131 ntBASIC15.18■□□□□ 0.02
Hdac3O88895 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.18■□□□□ 0.02
Hdac3O88895 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac3O88895 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.18■□□□□ 0.02
Hdac3O88895 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac3O88895 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms