Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.31■□□□□ 0.2
Hcn3O88705 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Gm13148-201ENSMUST00000118892 745 ntBASIC16.31■□□□□ 0.2
Hcn3O88705 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hcn3O88705 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hcn3O88705 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hcn3O88705 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.31■□□□□ 0.2
Hcn3O88705 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hcn3O88705 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.3■□□□□ 0.2
Hcn3O88705 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn3O88705 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hcn3O88705 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hcn3O88705 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.29■□□□□ 0.2
Hcn3O88705 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hcn3O88705 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hcn3O88705 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hcn3O88705 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hcn3O88705 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hcn3O88705 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn3O88705 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcn3O88705 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hcn3O88705 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcn3O88705 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hcn3O88705 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hcn3O88705 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcn3O88705 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn3O88705 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.27■□□□□ 0.2
Hcn3O88705 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.27■□□□□ 0.2
Hcn3O88705 Gm10418-201ENSMUST00000100943 576 ntBASIC16.27■□□□□ 0.2
Hcn3O88705 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hcn3O88705 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
Hcn3O88705 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn3O88705 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hcn3O88705 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.19
Hcn3O88705 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.27■□□□□ 0.19
Hcn3O88705 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Hcn3O88705 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hcn3O88705 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn3O88705 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn3O88705 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.26■□□□□ 0.19
Hcn3O88705 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn3O88705 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms