Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.14■□□□□ 0.01
Slc28a2O88627 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Gm11249-201ENSMUST00000117071 859 ntBASIC15.14■□□□□ 0.01
Slc28a2O88627 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc28a2O88627 Mir6349-201ENSMUST00000184059 97 ntBASIC15.14■□□□□ 0.01
Slc28a2O88627 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.14■□□□□ 0.01
Slc28a2O88627 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Slc28a2O88627 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc28a2O88627 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Gm13158-201ENSMUST00000122007 736 ntBASIC15.13■□□□□ 0.01
Slc28a2O88627 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Gm29257-201ENSMUST00000186115 639 ntBASIC15.13■□□□□ 0.01
Slc28a2O88627 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc28a2O88627 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc28a2O88627 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Mir2861-201ENSMUST00000175539 82 ntBASIC15.12■□□□□ 0.01
Slc28a2O88627 Gm27275-201ENSMUST00000184318 272 ntBASIC15.12■□□□□ 0.01
Slc28a2O88627 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.12■□□□□ 0.01
Slc28a2O88627 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Slc28a2O88627 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc28a2O88627 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.12■□□□□ 0.01
Slc28a2O88627 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc28a2O88627 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slc28a2O88627 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Gm15375-201ENSMUST00000119510 849 ntBASIC15.11■□□□□ 0.01
Slc28a2O88627 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.11■□□□□ 0.01
Slc28a2O88627 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.11■□□□□ 0.01
Slc28a2O88627 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc28a2O88627 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc28a2O88627 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Slc28a2O88627 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc28a2O88627 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc28a2O88627 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slc28a2O88627 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms