Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cldn1O88551 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cldn1O88551 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cldn1O88551 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cldn1O88551 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 AW822252-206ENSMUST00000208904 237 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Gm10566-201ENSMUST00000086739 996 ntBASIC14.57□□□□□ -0.08
Cldn1O88551 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.57□□□□□ -0.08
Cldn1O88551 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cldn1O88551 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldn1O88551 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cldn1O88551 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Gm6623-201ENSMUST00000173570 544 ntBASIC14.56□□□□□ -0.08
Cldn1O88551 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cldn1O88551 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldn1O88551 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.56□□□□□ -0.08
Cldn1O88551 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cldn1O88551 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.55□□□□□ -0.08
Cldn1O88551 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Cldn1O88551 Gm26039-201ENSMUST00000158152 144 ntBASIC14.55□□□□□ -0.08
Cldn1O88551 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cldn1O88551 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.55□□□□□ -0.08
Cldn1O88551 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cldn1O88551 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldn1O88551 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.54□□□□□ -0.08
Cldn1O88551 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cldn1O88551 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cldn1O88551 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Gm13401-201ENSMUST00000117074 291 ntBASIC14.54□□□□□ -0.08
Cldn1O88551 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.54□□□□□ -0.08
Cldn1O88551 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cldn1O88551 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Cldn1O88551 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cldn1O88551 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cldn1O88551 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cldn1O88551 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.54□□□□□ -0.08
Cldn1O88551 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cldn1O88551 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cldn1O88551 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cldn1O88551 Mir770-201ENSMUST00000103252 94 ntBASIC14.53□□□□□ -0.08
Cldn1O88551 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.53□□□□□ -0.08
Cldn1O88551 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Gm28659-201ENSMUST00000188013 759 ntBASIC14.53□□□□□ -0.08
Cldn1O88551 Gm5864-201ENSMUST00000202263 970 ntBASIC14.53□□□□□ -0.08
Cldn1O88551 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms