Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.73■□□□□ 0.11
Cops4O88544 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Cops4O88544 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.73■□□□□ 0.11
Cops4O88544 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.73■□□□□ 0.11
Cops4O88544 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Gm8495-201ENSMUST00000188740 694 ntBASIC15.73■□□□□ 0.11
Cops4O88544 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.73■□□□□ 0.11
Cops4O88544 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.73■□□□□ 0.11
Cops4O88544 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cops4O88544 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cops4O88544 Gm7290-201ENSMUST00000104990 617 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Gm12918-201ENSMUST00000120234 636 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Gm15710-201ENSMUST00000121821 636 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.72■□□□□ 0.11
Cops4O88544 Gm5075-201ENSMUST00000196916 622 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.72■□□□□ 0.11
Cops4O88544 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cops4O88544 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cops4O88544 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cops4O88544 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.71■□□□□ 0.11
Cops4O88544 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cops4O88544 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.71■□□□□ 0.11
Cops4O88544 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cops4O88544 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cops4O88544 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.71■□□□□ 0.1
Cops4O88544 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cops4O88544 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cops4O88544 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.71■□□□□ 0.1
Cops4O88544 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cops4O88544 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Gm10418-201ENSMUST00000100943 576 ntBASIC15.7■□□□□ 0.1
Cops4O88544 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Gm6211-202ENSMUST00000167849 925 ntBASIC15.7■□□□□ 0.1
Cops4O88544 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.7■□□□□ 0.1
Cops4O88544 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cops4O88544 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops4O88544 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cops4O88544 Gm7291-201ENSMUST00000199147 382 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms