Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Gm13312-201ENSMUST00000119631 718 ntBASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf17O88472 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf17O88472 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf17O88472 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Gm15165-201ENSMUST00000118140 502 ntBASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf17O88472 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf17O88472 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms