Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd46O88174 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.35■□□□□ 0.05
Cd46O88174 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd46O88174 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd46O88174 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd46O88174 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.34■□□□□ 0.05
Cd46O88174 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd46O88174 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd46O88174 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.34■□□□□ 0.05
Cd46O88174 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Cd46O88174 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cd46O88174 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd46O88174 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.34■□□□□ 0.05
Cd46O88174 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.34■□□□□ 0.05
Cd46O88174 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd46O88174 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd46O88174 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Cd46O88174 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cd46O88174 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.33■□□□□ 0.05
Cd46O88174 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cd46O88174 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cd46O88174 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Idnk-204ENSMUST00000226010 1898 ntBASIC15.33■□□□□ 0.04
Cd46O88174 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.33■□□□□ 0.04
Cd46O88174 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd46O88174 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.32■□□□□ 0.04
Cd46O88174 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.32■□□□□ 0.04
Cd46O88174 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cd46O88174 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cd46O88174 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cd46O88174 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd46O88174 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.31■□□□□ 0.04
Cd46O88174 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cd46O88174 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cd46O88174 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd46O88174 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms