Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Lsm2O35900 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.18■□□□□ 0.02
Lsm2O35900 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm2O35900 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm2O35900 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.17■□□□□ 0.02
Lsm2O35900 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Lsm2O35900 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm2O35900 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Lsm2O35900 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm2O35900 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.17■□□□□ 0.02
Lsm2O35900 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm2O35900 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.17■□□□□ 0.02
Lsm2O35900 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm2O35900 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm2O35900 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsm2O35900 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm2O35900 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lsm2O35900 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.16■□□□□ 0.02
Lsm2O35900 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.16■□□□□ 0.02
Lsm2O35900 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm2O35900 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.16■□□□□ 0.02
Lsm2O35900 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.16■□□□□ 0.02
Lsm2O35900 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.16■□□□□ 0.02
Lsm2O35900 Gm10493-201ENSMUST00000097270 612 ntBASIC15.16■□□□□ 0.02
Lsm2O35900 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm2O35900 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsm2O35900 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Lsm2O35900 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm2O35900 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsm2O35900 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.15■□□□□ 0.02
Lsm2O35900 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.15■□□□□ 0.02
Lsm2O35900 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lsm2O35900 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.15■□□□□ 0.02
Lsm2O35900 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm2O35900 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lsm2O35900 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm2O35900 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.15■□□□□ 0.02
Lsm2O35900 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.14■□□□□ 0.01
Lsm2O35900 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm2O35900 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm2O35900 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.14■□□□□ 0.01
Lsm2O35900 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Gm11927-201ENSMUST00000118472 759 ntBASIC15.14■□□□□ 0.01
Lsm2O35900 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms