Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.18■□□□□ 0.02
Alx4O35137 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Alx4O35137 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.18■□□□□ 0.02
Alx4O35137 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.18■□□□□ 0.02
Alx4O35137 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Alx4O35137 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Alx4O35137 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Alx4O35137 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Alx4O35137 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.17■□□□□ 0.02
Alx4O35137 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.17■□□□□ 0.02
Alx4O35137 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Alx4O35137 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Alx4O35137 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Alx4O35137 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx4O35137 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Alx4O35137 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.16■□□□□ 0.02
Alx4O35137 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx4O35137 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Alx4O35137 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx4O35137 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.16■□□□□ 0.02
Alx4O35137 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Alx4O35137 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Alx4O35137 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.16■□□□□ 0.02
Alx4O35137 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx4O35137 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.15■□□□□ 0.02
Alx4O35137 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Alx4O35137 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Alx4O35137 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx4O35137 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.14■□□□□ 0.01
Alx4O35137 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Alx4O35137 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.14■□□□□ 0.01
Alx4O35137 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Alx4O35137 Gm18284-201ENSMUST00000172604 624 ntBASIC15.14■□□□□ 0.01
Alx4O35137 Gm42569-201ENSMUST00000200539 472 ntBASIC15.14■□□□□ 0.01
Alx4O35137 Gm4974-201ENSMUST00000209974 875 ntBASIC15.14■□□□□ 0.01
Alx4O35137 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.14■□□□□ 0.01
Alx4O35137 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.14■□□□□ 0.01
Alx4O35137 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms