Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tcof1O08784 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Tcof1O08784 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.9■□□□□ 0.78
Tcof1O08784 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tcof1O08784 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tcof1O08784 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tcof1O08784 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.9■□□□□ 0.78
Tcof1O08784 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tcof1O08784 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tcof1O08784 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tcof1O08784 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Tcof1O08784 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.89■□□□□ 0.77
Tcof1O08784 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tcof1O08784 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Tcof1O08784 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tcof1O08784 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.89■□□□□ 0.77
Tcof1O08784 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tcof1O08784 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.89■□□□□ 0.77
Tcof1O08784 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tcof1O08784 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcof1O08784 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.88■□□□□ 0.77
Tcof1O08784 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.88■□□□□ 0.77
Tcof1O08784 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Tcof1O08784 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.88■□□□□ 0.77
Tcof1O08784 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Tcof1O08784 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tcof1O08784 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tcof1O08784 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.87■□□□□ 0.77
Tcof1O08784 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tcof1O08784 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Actl10-202ENSMUST00000226583 1501 ntBASIC19.87■□□□□ 0.77
Tcof1O08784 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Tcof1O08784 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Tcof1O08784 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.87■□□□□ 0.77
Tcof1O08784 Gm21559-201ENSMUST00000220638 855 ntBASIC19.87■□□□□ 0.77
Tcof1O08784 Gm8587-201ENSMUST00000076538 843 ntBASIC19.87■□□□□ 0.77
Tcof1O08784 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcof1O08784 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.86■□□□□ 0.77
Tcof1O08784 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tcof1O08784 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.86■□□□□ 0.77
Tcof1O08784 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tcof1O08784 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Tcof1O08784 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.85■□□□□ 0.77
Tcof1O08784 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Gm6345-202ENSMUST00000180900 204 ntBASIC19.85■□□□□ 0.77
Tcof1O08784 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Tcof1O08784 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.85■□□□□ 0.77
Tcof1O08784 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.85■□□□□ 0.77
Tcof1O08784 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tcof1O08784 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms