Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shisa8J3QNX5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shisa8J3QNX5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 AV356131-201ENSMUST00000206201 750 ntBASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Gm44549-201ENSMUST00000208351 577 ntBASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shisa8J3QNX5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Gm6211-202ENSMUST00000167849 925 ntBASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Shisa8J3QNX5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shisa8J3QNX5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shisa8J3QNX5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shisa8J3QNX5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shisa8J3QNX5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Shisa8J3QNX5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.5■□□□□ 0.07
Shisa8J3QNX5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Shisa8J3QNX5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms