Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34bJ3QNR8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Gm27357-201ENSMUST00000183754 135 ntBASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Phf7-203ENSMUST00000226565 1971 ntBASIC20.79■□□□□ 0.92
Trim34bJ3QNR8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.78■□□□□ 0.92
Trim34bJ3QNR8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34bJ3QNR8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Trim34bJ3QNR8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim34bJ3QNR8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim34bJ3QNR8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim34bJ3QNR8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms