Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh1F7BJK1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Gm10602-201ENSMUST00000098239 609 ntBASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh1F7BJK1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pcdh1F7BJK1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 611.2 ms