Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.57■□□□□ 0.08
TprF6ZDS4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
TprF6ZDS4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.57■□□□□ 0.08
TprF6ZDS4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TprF6ZDS4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.57■□□□□ 0.08
TprF6ZDS4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.57■□□□□ 0.08
TprF6ZDS4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.57■□□□□ 0.08
TprF6ZDS4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TprF6ZDS4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TprF6ZDS4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Idnk-204ENSMUST00000226010 1898 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Mir770-201ENSMUST00000103252 94 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Rps4l-201ENSMUST00000071745 943 ntBASIC15.56■□□□□ 0.08
TprF6ZDS4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.56■□□□□ 0.08
TprF6ZDS4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TprF6ZDS4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.55■□□□□ 0.08
TprF6ZDS4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TprF6ZDS4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TprF6ZDS4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.55■□□□□ 0.08
TprF6ZDS4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.55■□□□□ 0.08
TprF6ZDS4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.55■□□□□ 0.08
TprF6ZDS4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TprF6ZDS4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Gm15920-201ENSMUST00000118998 402 ntBASIC15.54■□□□□ 0.08
TprF6ZDS4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.54■□□□□ 0.08
TprF6ZDS4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms