Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44357-201ENSMUST00000195897 142 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm19658-201ENSMUST00000196231 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44367-201ENSMUST00000196836 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44350-201ENSMUST00000197197 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44390-201ENSMUST00000197533 144 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44313-201ENSMUST00000198018 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44486-201ENSMUST00000198508 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44454-201ENSMUST00000198541 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44314-201ENSMUST00000199263 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44394-201ENSMUST00000199558 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44484-201ENSMUST00000199873 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44466-201ENSMUST00000200264 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm44359-201ENSMUST00000200671 138 ntBASIC15.18■□□□□ 0.02
Shank1D3YZU1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Gm12644-201ENSMUST00000119935 606 ntBASIC15.17■□□□□ 0.02
Shank1D3YZU1 Gm15372-201ENSMUST00000120729 834 ntBASIC15.17■□□□□ 0.02
Shank1D3YZU1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.17■□□□□ 0.02
Shank1D3YZU1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shank1D3YZU1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.16■□□□□ 0.02
Shank1D3YZU1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.16■□□□□ 0.02
Shank1D3YZU1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shank1D3YZU1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.15■□□□□ 0.02
Shank1D3YZU1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shank1D3YZU1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms