Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syce3B5KM66 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syce3B5KM66 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syce3B5KM66 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Syce3B5KM66 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syce3B5KM66 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syce3B5KM66 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Syce3B5KM66 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Syce3B5KM66 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.51■□□□□ 0.71
Syce3B5KM66 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Syce3B5KM66 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Syce3B5KM66 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Syce3B5KM66 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syce3B5KM66 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Syce3B5KM66 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Syce3B5KM66 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Syce3B5KM66 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Syce3B5KM66 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.5■□□□□ 0.71
Syce3B5KM66 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Syce3B5KM66 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Syce3B5KM66 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syce3B5KM66 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.49■□□□□ 0.71
Syce3B5KM66 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.49■□□□□ 0.71
Syce3B5KM66 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Syce3B5KM66 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syce3B5KM66 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.48■□□□□ 0.71
Syce3B5KM66 Gm7291-201ENSMUST00000199147 382 ntBASIC19.48■□□□□ 0.71
Syce3B5KM66 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syce3B5KM66 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Syce3B5KM66 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms