Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Gm27405-201ENSMUST00000184201 112 ntBASIC15.86■□□□□ 0.13
IsxA1A546 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.86■□□□□ 0.13
IsxA1A546 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
IsxA1A546 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
IsxA1A546 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IsxA1A546 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.85■□□□□ 0.13
IsxA1A546 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
IsxA1A546 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
IsxA1A546 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.85■□□□□ 0.13
IsxA1A546 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IsxA1A546 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IsxA1A546 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.85■□□□□ 0.13
IsxA1A546 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
IsxA1A546 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
IsxA1A546 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.84■□□□□ 0.13
IsxA1A546 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.84■□□□□ 0.13
IsxA1A546 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
IsxA1A546 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
IsxA1A546 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
IsxA1A546 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IsxA1A546 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IsxA1A546 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IsxA1A546 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IsxA1A546 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IsxA1A546 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.83■□□□□ 0.12
IsxA1A546 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IsxA1A546 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.83■□□□□ 0.12
IsxA1A546 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IsxA1A546 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IsxA1A546 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IsxA1A546 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IsxA1A546 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.82■□□□□ 0.12
IsxA1A546 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.82■□□□□ 0.12
IsxA1A546 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.82■□□□□ 0.12
IsxA1A546 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IsxA1A546 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IsxA1A546 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IsxA1A546 Gm10849-201ENSMUST00000100397 618 ntBASIC15.81■□□□□ 0.12
IsxA1A546 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IsxA1A546 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms