Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12-1A0N8R1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12-1A0N8R1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Gm42545-201ENSMUST00000202755 922 ntBASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-1A0N8R1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-1A0N8R1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms