Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc112A0AUP1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Gm43183-201ENSMUST00000200632 547 ntBASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc112A0AUP1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc112A0AUP1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc112A0AUP1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc112A0AUP1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc112A0AUP1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc112A0AUP1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Gm37856-201ENSMUST00000191634 999 ntBASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms