Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lnp1A0A1B0GSK3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Lnp1A0A1B0GSK3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lnp1A0A1B0GSK3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.13□□□□□ -0.15
Lnp1A0A1B0GSK3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms