Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap99A0A140LIX9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap99A0A140LIX9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gm21559-201ENSMUST00000220638 855 ntBASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gm8587-201ENSMUST00000076538 843 ntBASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cfap99A0A140LIX9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cfap99A0A140LIX9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Gm5587-201ENSMUST00000206270 674 ntBASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cfap99A0A140LIX9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap99A0A140LIX9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Gm9013-201ENSMUST00000132939 882 ntBASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Mir1668-201ENSMUST00000184114 107 ntBASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Gm27704-201ENSMUST00000185094 107 ntBASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap99A0A140LIX9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms