Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Gm27628-201ENSMUST00000184911 107 ntBASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Frmpd3A0A140LIW3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Frmpd3A0A140LIW3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 AV026068-213ENSMUST00000223675 1171 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.23■□□□□ 0.83
Frmpd3A0A140LIW3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Frmpd3A0A140LIW3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Frmpd3A0A140LIW3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Frmpd3A0A140LIW3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Frmpd3A0A140LIW3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Frmpd3A0A140LIW3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Frmpd3A0A140LIW3 Gm12497-201ENSMUST00000138778 237 ntBASIC20.19■□□□□ 0.82
Frmpd3A0A140LIW3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms