Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc194A0A140LIT1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Gm37292-201ENSMUST00000192062 758 ntBASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc194A0A140LIT1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Gm10517-202ENSMUST00000192970 758 ntBASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Trmt13-210ENSMUST00000198454 880 ntBASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc194A0A140LIT1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc194A0A140LIT1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms