Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgb8A0A140LI48 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Pcdhgb8A0A140LI48 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgb8A0A140LI48 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgb8A0A140LI48 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm11927-201ENSMUST00000118472 759 ntBASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm10252-201ENSMUST00000209541 832 ntBASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgb8A0A140LI48 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Zfp783-201ENSMUST00000095946 670 ntBASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb8A0A140LI48 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm6576-201ENSMUST00000169678 883 ntBASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb8A0A140LI48 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb8A0A140LI48 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb8A0A140LI48 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms