Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Reep4-203ENSMUST00000226563 1444 ntBASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm13146-201ENSMUST00000118508 780 ntBASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm13534-201ENSMUST00000121169 513 ntBASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms