Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-2A0A0G2JF93 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-2A0A0G2JF93 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-2A0A0G2JF93 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-2A0A0G2JF93 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-2A0A0G2JF93 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-2A0A0G2JF93 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-2A0A0G2JF93 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13n-2A0A0G2JF93 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13n-2A0A0G2JF93 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms