Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv5-43A0A0B4J1J2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.33■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.33■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.33■□□□□ 0.37
Igkv5-43A0A0B4J1J2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm6623-201ENSMUST00000173570 544 ntBASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm7284-201ENSMUST00000131667 944 ntBASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms