Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
Trbv20A0A0B4J1H5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trbv20A0A0B4J1H5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Gm42778-201ENSMUST00000199644 553 ntBASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv20A0A0B4J1H5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Zfp783-201ENSMUST00000095946 670 ntBASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv20A0A0B4J1H5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv20A0A0B4J1H5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms