Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sirpb1aA0A0A6YYP6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Mir6349-201ENSMUST00000184059 97 ntBASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Mtag2-201ENSMUST00000058665 714 ntBASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.13■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.12■□□□□ 0.17
Sirpb1aA0A0A6YYP6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms