Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm15565-201ENSMUST00000118890 427 ntBASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm13559-201ENSMUST00000120476 863 ntBASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ighv1-52A0A0A6YXC3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm43799-201ENSMUST00000201845 579 ntBASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ighv1-52A0A0A6YXC3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms